Process Batch Table and Validate Cancer Types — check_cancer

Processes input data containing cancer types and validates each category against a predefined list of supported cancer types (`timer_available_cancers`).

Usage

check_cancer_types(args)

Arguments

args

A list containing input parameters:

batch: Character. Path to a CSV file (optional).
expression: Character vector of expression identifiers (used if `batch` is NULL).
category: Character vector of cancer types (used if `batch` is NULL).

Value

A character matrix with two columns:

Column 1: Expression identifiers
Column 2: Cancer categories

Examples

args <- list(
  expression = c("exp1", "exp2"),
  category = c("luad", "brca"),
  batch = NULL
)
result <- check_cancer_types(args)